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JGI sequenced data

Non-public resource

  • Restricted to view icon - Non-public resource. Access can be restricted. For access information please email to Principal investigator


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  • Group Fungi Genomes icon - Group of Fungal Genomes
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    New Feature:

    My Favorites

    New Feature Based on Your Feedback

    You asked for it and we are delivering.
    The JGI Genome Portal Group is introducing a new way to track your projects. Login to start using it.
    Find more about "My favorites" here.

    Please provide your about this feature or/and suggestions to our team.

    New collaboration:

    KBase is a platform enabling systems biology research and comparative functional genomics of microbes and plants while promoting the sharing of results and methods with other scientists. Microbial genome reads and assemblies can be transferred directly from the JGI Genome Portal to KBase for assembly, annotation, metabolic modeling, and more using the Push to KBase feature. Any data you transfer to KBase is private unless you choose to share it.

    Learn more about KBase.

    For Novice
    For Experienced

    Did you try to download with Globus service?

    JGI provides a way to download different data with API as well

    Learn More about Download Options

    For Principal Investigators

    Do you know how to grant access to your project/genome?

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    Go to the "Tree of Life"

    icon representing GOLDGenomes OnLine Database (GOLD) - a resource for comprehensive access to information regarding genome and metagenome sequencing projects, and their associated metadata, around the world.
    icon representing IMGIntegrated Microbial Genomes (IMG) and Metagenomes (IMG/M) - resources for comparative analysis and annotation of all publicly available genomes.
    icon representing Mycocosm Mycocosm - the Fungal Genomics Resource. Provides access to the annotated fungal genomes and tools for their analysis.
    icon representing PhytozomePhytozome - a comparative hub for green plant genomes and gene family data and analysis.
    Explore other JGI Systems

    Visit JGI Data Management & Analysis Systems for comparative analysis and annotation of all publicly available genomes.

    JGI provides a variety of ways to download different data
    1. Download with web UI
    2. Download with Globus service
    3. Download with API
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